Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | D560_2473 | Q5WHY3 | Negative | 2316438 - 2317946 | 54760.8 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2474 | P03030 | Positive | 2318074 - 2318964 | 32527.4 |
| sugar (and other) transporter family protein | D560_2475 | Q9S3J9 | Negative | 2318955 - 2320142 | 41186.9 |
| phosphoglycolate phosphatase, bacterial | D560_2476 | Q4UVL3 | Negative | 2320389 - 2321063 | 24173.8 |
| 3-demethylubiquinone-9 3-o-methyltransferase | D560_2477 | Q2L2T5 | Negative | 2321060 - 2321785 | 26258.5 |
| ompa family protein | D560_2478 | Q05146 | Negative | 2321859 - 2322440 | 20978.9 |
| hypothetical protein | D560_2479 | Not Available | Negative | 2322754 - 2322987 | 8895.87 |
| dna gyrase, a subunit | D560_2480 | P41513 | Positive | 2322982 - 2325492 | 92875.7 |
| phosphoserine transaminase | D560_2481 | Q2L2T1 | Positive | 2325500 - 2326630 | 40784.6 |
| chorismate mutase | D560_2482 | Q9ZHY3 | Positive | 2326623 - 2327708 | 38943.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




