Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2464 | Not Available | Negative | 2309511 - 2309675 | 5619.78 |
| integrase core domain protein | D560_2465 | Not Available | Positive | 2309869 - 2310099 | 8891.9 |
| htra suppressor protein | D560_2466 | Q8FDB5 | Positive | 2310393 - 2310722 | 11923.1 |
| toxin yhav | D560_2467 | Q8FDB4 | Positive | 2310719 - 2311225 | 19241.9 |
| hypothetical protein | D560_2468 | Not Available | Negative | 2311262 - 2311375 | 4047.92 |
| transposase family protein | D560_2469 | Q06126 | Negative | 2311447 - 2312361 | 35312.7 |
| integrase core domain protein | D560_2470 | P24577 | Positive | 2312748 - 2313569 | 31139.7 |
| transposase family protein | D560_2471 | Q06126 | Negative | 2313642 - 2314862 | 47435.5 |
| Tmrna,resume consensus sequence (at 85): aacaaacgccaacgacga | Not Available | Not Available | Positive | 2314983 - 2315371 | Not Available |
| tripartite tricarboxylate transporter receptor family protein | D560_2472 | P0A177 | Negative | 2315430 - 2316266 | 28973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




