Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multi-copper polyphenol oxidoreductase laccase family protein | D560_2434 | Q9PET8 | Positive | 2281190 - 2281525 | 12297.8 |
| poly-beta-hydroxybutyrate polymerase | D560_2435 | P23608 | Positive | 2281687 - 2283234 | 56820.2 |
| acetoacetyl-coa reductase | D560_2436 | P14697 | Positive | 2283325 - 2284062 | 26393.5 |
| polyhydroxyalkanoate synthesis repressor phar | D560_2437 | P45373 | Positive | 2284154 - 2284714 | 21348.8 |
| fe2+ transport family protein | D560_2438 | Q8FWR4 | Positive | 2284887 - 2285426 | 19531.4 |
| cupredoxin-like domain protein | D560_2439 | Q9ZDD7 | Positive | 2285471 - 2285761 | 10813.0 |
| iron permease ftr1 family protein | D560_2440 | Q8XAS8 | Positive | 2285772 - 2286269 | 18281.5 |
| putative permease | D560_2441 | Not Available | Positive | 2286224 - 2286616 | 14295.8 |
| 4fe-4s binding domain protein | D560_2442 | P52636 | Positive | 2286761 - 2288017 | 46116.8 |
| phenazine biosynthesis, phzf family protein | D560_2443 | Q9CKV2 | Positive | 2288105 - 2288977 | 30857.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




