Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2424 | Not Available | Positive | 2270760 - 2270879 | 4302.37 |
| pepsy-associated tm helix family protein | D560_2425 | P42514 | Positive | 2271136 - 2272044 | 32806.6 |
| putative membrane protein | D560_2426 | Not Available | Positive | 2271998 - 2272489 | 18116.4 |
| hypothetical protein | D560_2427 | Not Available | Positive | 2272489 - 2272827 | 12117.1 |
| tryptophan--trna ligase | D560_2428 | Q7WGI7 | Positive | 2272871 - 2274193 | 48111.6 |
| s1 rna binding domain protein | D560_2429 | Q45388 | Negative | 2274247 - 2276634 | 86996.0 |
| dead/deah box helicase family protein | D560_2430 | P76257 | Positive | 2276800 - 2278848 | 74756.2 |
| outer membrane assembly lipoyfio family protein | D560_2431 | Q9K0B1 | Negative | 2278914 - 2279696 | 29664.7 |
| pseudouridine synthase, rlua family protein | D560_2432 | Q8XYX8 | Positive | 2279815 - 2280774 | 34822.7 |
| multi-copper polyphenol oxidoreductase laccase family protein | D560_2433 | P33663 | Positive | 2280762 - 2281193 | 15217.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




