Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb dependent receptor family protein | D560_2404 | P81549 | Negative | 2248188 - 2249318 | 40979.1 |
| tonb-dependent receptor plug domain protein | D560_2405 | P81549 | Negative | 2249315 - 2250265 | 34160.9 |
| transposase family protein | D560_2406 | Q06126 | Negative | 2250510 - 2251730 | 47479.6 |
| phosphate acetyl/butaryl transferase family protein | D560_2407 | P76558 | Negative | 2251860 - 2252057 | 6867.47 |
| malic enzyme, nad binding domain protein | D560_2408 | P43837 | Negative | 2252057 - 2254141 | 75938.1 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D560_2409 | Q59637 | Negative | 2254315 - 2256972 | 98137.2 |
| oligopeptide transporter, opt family | D560_2410 | P44016 | Positive | 2257208 - 2257945 | 25332.7 |
| oligopeptide transporter, opt family | D560_2411 | P44016 | Positive | 2257939 - 2259252 | 45724.3 |
| 2-oxoglutarate dehydrogenase e1 component domain protein | D560_2412 | Q59106 | Positive | 2259692 - 2259994 | 11342.2 |
| oxoglutarate dehydrogenase (succinyl-transferring), e1 component | D560_2413 | Q59106 | Positive | 2260057 - 2262459 | 89383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




