Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | D560_2384 | Q937P0 | Negative | 2230635 - 2231528 | 32067.3 |
| malate dehydrogenase | D560_2385 | Q2L068 | Negative | 2231719 - 2232708 | 35605.1 |
| gntr-family transcriptional regulator | D560_2386 | P13669 | Positive | 2233120 - 2233821 | 26566.1 |
| succinate dehydrogenase, cytochrome b556 subunit | D560_2387 | P51055 | Positive | 2233943 - 2234356 | 14896.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | D560_2388 | P51057 | Positive | 2234356 - 2234739 | 14602.4 |
| succinate dehydrogenase, flavoprotein subunit | D560_2389 | G4V4G6 | Positive | 2234743 - 2236521 | 64956.3 |
| succinate dehydrogenase and fumarate reductase iron-sulfur family protein | D560_2390 | P07014 | Positive | 2236535 - 2237251 | 27228.0 |
| flavinator of succinate dehydrogenase family protein | D560_2391 | Q8XXX1 | Positive | 2237277 - 2237537 | 10083.2 |
| citrate (si)-synthase | D560_2392 | O33915 | Positive | 2237558 - 2238859 | 48041.7 |
| transposase family protein | D560_2393 | Q06126 | Positive | 2239008 - 2240012 | 38971.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




