Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase, b subunit | D560_2354 | B0RVK3 | Positive | 2201297 - 2201950 | 22758.0 |
| helix-turn-helix domain, rpir family protein | D560_2355 | Q88P32 | Positive | 2202151 - 2203035 | 31159.5 |
| isoaspartyl peptidase | D560_2356 | P37595 | Positive | 2203074 - 2204012 | 32498.5 |
| nickel import atp-binding protein nike | D560_2357 | Q6D3A9 | Positive | 2204050 - 2205930 | 68788.5 |
| bacterial extracellular solute-binding s, 5 middle family protein | D560_2358 | Q6D3B0 | Positive | 2206005 - 2207558 | 57314.9 |
| glutathione transport system permease protein gsic | D560_2359 | Q8FJK9 | Positive | 2207632 - 2208552 | 34117.9 |
| glutathione transport system permease protein gsid | D560_2360 | Q6D3B2 | Positive | 2208605 - 2209453 | 30767.4 |
| peptidase s58 family protein | D560_2361 | A0MTQ2 | Positive | 2209543 - 2210610 | 37578.6 |
| d-aminopeptidase family protein | D560_2362 | P26902 | Positive | 2210621 - 2211439 | 28686.6 |
| metallopeptidase m24 family protein | D560_2363 | O54975 | Positive | 2211454 - 2213250 | 64681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




