Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate binding domain protein | D560_2334 | Not Available | Negative | 2180380 - 2180658 | 10357.6 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2335 | P72131 | Negative | 2180692 - 2181303 | 22774.3 |
| periplasmic binding domain protein | D560_2336 | Q2YL86 | Positive | 2181461 - 2182678 | 42743.1 |
| methylmalonate-semialdehyde dehydrogenase | D560_2337 | Q0WM29 | Positive | 2182742 - 2184226 | 53038.7 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2338 | B4E8V9 | Positive | 2184382 - 2185326 | 34957.4 |
| transposase family protein | D560_2339 | Q06126 | Positive | 2185453 - 2186673 | 47435.5 |
| hypothetical protein | D560_2340 | Not Available | Positive | 2186841 - 2187176 | 12041.9 |
| hypothetical protein | D560_2341 | P76190 | Negative | 2187372 - 2188037 | 24253.9 |
| hypothetical protein | D560_2342 | Not Available | Negative | 2188163 - 2188435 | 9725.11 |
| propionate--coa ligase | D560_2343 | P77495 | Positive | 2188550 - 2190172 | 58574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




