Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2314 | Not Available | Positive | 2161892 - 2162308 | 15260.7 |
| rna polymerase sigma factor rpoe | D560_2315 | Q06198 | Positive | 2162305 - 2162904 | 22826.1 |
| putative sigma-e factor negative regulatory protein | D560_2316 | Not Available | Positive | 2163058 - 2163402 | 12049.4 |
| peptidase do family protein | D560_2317 | B1J4D7 | Positive | 2164476 - 2165978 | 51966.4 |
| transposase family protein | D560_2318 | Q06126 | Positive | 2166063 - 2167283 | 47381.5 |
| helix-turn-helix family protein | D560_2319 | Not Available | Positive | 2167469 - 2168095 | 22055.3 |
| integrase core domain protein | D560_2320 | P25438 | Positive | 2168068 - 2168418 | 13674.2 |
| gtp-binding protein lepa | D560_2321 | Q2KWY3 | Positive | 2168486 - 2170279 | 66023.1 |
| signal peptidase i | D560_2322 | P26844 | Positive | 2170303 - 2171187 | 33751.8 |
| ribonuclease iii | D560_2323 | Q2KWY0 | Positive | 2171193 - 2171948 | 27093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




