Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | D560_2284 | A9IIC5 | Positive | 2132719 - 2133894 | 44909.2 |
| endoribonuclease l-psp family protein | D560_2285 | O30825 | Positive | 2133933 - 2134286 | 12701.2 |
| putative excinuclease abc subunit a | D560_2286 | Not Available | Negative | 2134317 - 2134610 | 10277.4 |
| glucose-phosphotransferase regulator family protein | D560_2287 | A8GGH0 | Negative | 2134829 - 2135659 | 30580.8 |
| rela/spot family protein | D560_2288 | P0AG22 | Positive | 2135865 - 2138111 | 82615.8 |
| sugar (and other) transporter family protein | D560_2289 | P16482 | Negative | 2138131 - 2139444 | 47562.3 |
| acetylornithine deacetylase | D560_2290 | C5BC62 | Positive | 2139610 - 2140761 | 41514.3 |
| tryptophan synthase, beta subunit | D560_2291 | Q7WD04 | Positive | 2140902 - 2142101 | 43316.6 |
| tryptophan synthase, alpha subunit | D560_2292 | Q7WD05 | Positive | 2142107 - 2142961 | 29825.8 |
| acetyl-coa carboxylase, carboxyl transferase, beta subunit | D560_2293 | B2JQF1 | Positive | 2142991 - 2143869 | 32011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




