Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain protein | D560_2254 | P45023 | Negative | 2109010 - 2109690 | 24771.1 |
| bacterial extracellular solute-binding s, 3 family protein | D560_2255 | P42199 | Negative | 2109724 - 2110509 | 28280.7 |
| ppic-type ppiase domain protein | D560_2256 | Q7WCX5 | Negative | 2110812 - 2111588 | 28933.0 |
| intracellular septation protein a | D560_2257 | Q8XYL2 | Negative | 2111911 - 2112477 | 21431.7 |
| methionine-r-sulfoxide reductase | D560_2258 | Q8UGX7 | Negative | 2112474 - 2112875 | 14987.5 |
| abc transporter family protein | D560_2259 | Q9RRL9 | Positive | 2112926 - 2113603 | 24762.1 |
| cobalt transport family protein | D560_2260 | Q2KBP6 | Positive | 2113600 - 2114187 | 21220.7 |
| bioy family protein | D560_2261 | Q2KBP7 | Positive | 2114232 - 2114630 | 13829.8 |
| receptor ligand binding region family protein | D560_2262 | Q8YEE8 | Positive | 2114858 - 2116021 | 40710.3 |
| branched-chain amino acid transport system / permease component family protein | D560_2263 | P0A2J2 | Positive | 2116183 - 2117220 | 36895.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




