Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix family protein | D560_2244 | Not Available | Positive | 2096737 - 2097363 | 22055.3 |
| integrase core domain protein | D560_2245 | P25438 | Positive | 2097336 - 2097686 | 13674.2 |
| trna threonylcarbamoyl adenosine modification protein yeaz | D560_2246 | Q87RD1 | Positive | 2097780 - 2099006 | 43562.8 |
| hypothetical protein | D560_2247 | Not Available | Positive | 2099074 - 2099217 | 5291.34 |
| uracil-dna glycosylase, 4 family protein | D560_2248 | Q5SKC5 | Positive | 2099196 - 2099894 | 25388.5 |
| major facilitator superfamily protein | D560_2249 | Q6D108 | Negative | 2099908 - 2101221 | 47114.5 |
| chromosome segregation protein smc | D560_2250 | A9II65 | Positive | 2101484 - 2105014 | 130663.0 |
| putative membrane protein | D560_2251 | Not Available | Positive | 2105063 - 2106154 | 38861.2 |
| dna ligase, nad-dependent | D560_2252 | Q2KUU5 | Positive | 2106154 - 2108238 | 74740.5 |
| abc transporter family protein | D560_2253 | P39456 | Negative | 2108243 - 2109013 | 27928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




