Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | D560_2234 | P30958 | Negative | 2087184 - 2090150 | 109227.0 |
| transcription-repair coupling factor domain protein | D560_2235 | P30958 | Negative | 2090171 - 2090620 | 16697.2 |
| hypothetical protein | D560_2236 | Q7WCW3 | Positive | 2090786 - 2091376 | 20927.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | D560_2237 | Q2KUX6 | Positive | 2091373 - 2091861 | 17044.6 |
| transposase family protein | D560_2238 | Q06126 | Negative | 2091900 - 2093120 | 47493.6 |
| alkylhydroperoxidase ahpd family core domain protein | D560_2239 | B6IQZ3 | Negative | 2093251 - 2093769 | 18355.9 |
| ahpc/tsa family protein | D560_2240 | A0R1V9 | Negative | 2093826 - 2094374 | 20226.9 |
| putative oxidative stress related two component system, sensor kinase | D560_2241 | P0AEJ4 | Negative | 2094438 - 2095673 | 45398.4 |
| hypothetical protein | D560_2242 | Not Available | Negative | 2095692 - 2095832 | 5181.76 |
| transcriptional regulatory protein ompr | D560_2243 | P0AA18 | Negative | 2095867 - 2096601 | 27730.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




