Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--alanine ligase | D560_2174 | Q2KVG1 | Positive | 2031334 - 2032740 | 50009.1 |
| d-alanine--d-alanine ligase family protein | D560_2175 | Q2KVG4 | Positive | 2032737 - 2033690 | 33997.5 |
| cell division ftsq family protein | D560_2176 | Q7VUQ6 | Positive | 2033699 - 2034523 | 30261.0 |
| cell division protein ftsa | D560_2177 | P47203 | Positive | 2034528 - 2035754 | 44093.7 |
| cell division protein ftsz | D560_2178 | P47204 | Positive | 2035950 - 2037134 | 41330.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | D560_2179 | Q2KVH1 | Positive | 2037449 - 2038297 | 31239.3 |
| putative lipoprotein | D560_2180 | Not Available | Positive | 2038388 - 2038603 | 7471.93 |
| flagellar hook-length control flik family protein | D560_2181 | Not Available | Negative | 2038640 - 2039050 | 14471.8 |
| peptidase m23 family protein | D560_2182 | P0AFT0 | Positive | 2039177 - 2040160 | 34597.2 |
| preprotein translocase, seca subunit | D560_2183 | Q2KVH9 | Positive | 2040321 - 2043056 | 102887.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




