Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | D560_2164 | Q2KVE4 | Positive | 2020483 - 2021556 | 38343.8 |
| cell division protein ftsl | D560_2165 | Q7VUP7 | Positive | 2021556 - 2021843 | 10661.1 |
| penicillin binding transpeptidase domain protein | D560_2166 | P08149 | Positive | 2021840 - 2023774 | 70589.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase family protein | D560_2167 | A6T2G3 | Positive | 2023764 - 2026391 | 91293.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D560_2168 | A9I4U2 | Positive | 2026381 - 2027550 | 42742.6 |
| hypothetical protein | D560_2169 | Not Available | Negative | 2027537 - 2027737 | 6974.37 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | D560_2170 | Q2KVF5 | Positive | 2027705 - 2029078 | 48510.1 |
| cell division protein ftsw | D560_2171 | Q2SZI4 | Positive | 2029075 - 2030268 | 43140.4 |
| glycosyltransferase family 28 n-terminal domain protein | D560_2172 | Q2KVG0 | Positive | 2030265 - 2030624 | 12706.0 |
| glycosyltransferase family 28 c-terminal domain protein | D560_2173 | Q2KVG0 | Positive | 2030618 - 2031337 | 25390.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




