Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | D560_2094 | Q57124 | Positive | 1956656 - 1957285 | 22477.9 |
| dna polymerase iii, epsilon subunit | D560_2095 | P03007 | Positive | 1957293 - 1958027 | 26014.7 |
| Trna-val | Not Available | Not Available | Positive | 1958077 - 1958151 | Not Available |
| transposase family protein | D560_2097 | Q06126 | Negative | 1958196 - 1959416 | 47465.5 |
| hypothetical protein | D560_2098 | Not Available | Negative | 1959593 - 1959727 | 4736.77 |
| hlyd secretion family protein | D560_2099 | P37626 | Positive | 1959791 - 1960777 | 35121.4 |
| heme abc exporter, atp-binding protein ccma | D560_2100 | P37624 | Positive | 1960781 - 1963504 | 99324.3 |
| inner membrane transport permease yhhj | D560_2101 | P0AGH1 | Positive | 1963505 - 1964632 | 40978.0 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | D560_2102 | O31101 | Positive | 1964723 - 1966057 | 47828.7 |
| putative membrane protein | D560_2103 | Not Available | Positive | 1966062 - 1966238 | 6362.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




