Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2074 | Not Available | Positive | 1941042 - 1941857 | 30616.5 |
| nicotinate-nucleotide diphosphorylase | D560_2075 | P77938 | Positive | 1941961 - 1942851 | 31167.8 |
| tripartite tricarboxylate transporter receptor family protein | D560_2076 | Q45389 | Positive | 1942955 - 1943896 | 32792.7 |
| hypothetical protein | D560_2077 | P45462 | Negative | 1943897 - 1944217 | 11519.8 |
| hypothetical protein | D560_2078 | Not Available | Negative | 1944214 - 1944606 | 13725.6 |
| tonb dependent receptor family protein | D560_2079 | Q9JZN9 | Negative | 1944682 - 1946757 | 74313.3 |
| hypothetical protein | D560_2080 | Not Available | Negative | 1946805 - 1947113 | 10678.8 |
| enoyl-(acyl carrier) reductase family protein | D560_2081 | P0AEK5 | Negative | 1947300 - 1947683 | 13085.8 |
| short chain dehydrogenase family protein | D560_2082 | Q9K151 | Negative | 1947656 - 1948084 | 15570.5 |
| lysm domain protein | D560_2083 | P0AEZ8 | Negative | 1948143 - 1949429 | 47375.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




