Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2064 | P0DUU5 | Positive | 1932566 - 1933114 | 19916.7 |
| lysr substrate binding domain protein | D560_2065 | Not Available | Positive | 1933126 - 1933383 | 9535.73 |
| lyase family protein | D560_2066 | Q8PUM6 | Negative | 1933432 - 1935000 | 56480.7 |
| universal stress family protein | D560_2067 | P74897 | Positive | 1935223 - 1935660 | 15600.9 |
| cupin domain protein | D560_2068 | Not Available | Negative | 1935672 - 1936037 | 13551.0 |
| nudix domain protein | D560_2069 | Q7NTZ8 | Negative | 1936113 - 1936886 | 28379.2 |
| pqq enzyme repeat family protein | D560_2070 | P05465 | Positive | 1937113 - 1939215 | 74423.3 |
| response regulator | D560_2071 | Not Available | Positive | 1939724 - 1940065 | 12215.7 |
| putative transcriptional regulator | D560_2072 | P0AA18 | Positive | 1940092 - 1940571 | 17408.1 |
| hypothetical protein | D560_2073 | Not Available | Negative | 1940591 - 1940734 | 4833.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




