Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly accessory family protein | D560_2033 | Q2KV08 | Positive | 1907518 - 1907889 | 13228.5 |
| helix-turn-helix family protein | D560_2034 | P37007 | Positive | 1908043 - 1908906 | 32297.8 |
| anhydro-n-acetylmuramic acid kinase | D560_2035 | Q2KV10 | Negative | 1908990 - 1910117 | 39117.1 |
| peptidase m23 family protein | D560_2036 | P44693 | Negative | 1910126 - 1911541 | 51689.4 |
| tyrosine--trna ligase | D560_2037 | Q2KV13 | Positive | 1911821 - 1913050 | 45437.7 |
| phosphatidylethanolamine-binding family protein | D560_2038 | P12994 | Positive | 1913089 - 1913463 | 13874.2 |
| phosphatidylethanolamine-binding family protein | D560_2039 | O26373 | Positive | 1913433 - 1913744 | 11089.0 |
| aminotransferase class-v family protein | D560_2040 | Q2KV15 | Positive | 1913948 - 1915198 | 44945.8 |
| transcriptional regulator nrdr | D560_2041 | Q2KV16 | Positive | 1915395 - 1915844 | 16892.3 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_2042 | A0A0H2ZIC3 | Negative | 1915849 - 1916811 | 34859.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




