Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| receptor ligand binding region family protein | D560_2013 | Q8YC99 | Negative | 1890237 - 1891406 | 40882.9 |
| esterase family protein | D560_2014 | Q8R164 | Negative | 1891429 - 1892235 | 29811.5 |
| amp-binding enzyme family protein | D560_2015 | Q8GQN9 | Negative | 1892232 - 1892549 | 11637.0 |
| benzoate--coa ligase | D560_2016 | Q8GQN9 | Negative | 1892546 - 1893787 | 44336.1 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | D560_2017 | Q84HH8 | Negative | 1893848 - 1895413 | 54829.3 |
| hypothetical protein | D560_2018 | Not Available | Negative | 1895424 - 1895900 | 17188.2 |
| helix-turn-helix family protein | D560_2019 | Q3AH55 | Positive | 1896084 - 1896992 | 33444.5 |
| benzoyl-coa-dihydrodiol lyase | D560_2020 | Q84HH6 | Positive | 1897158 - 1898786 | 60160.7 |
| benzoyl-coa oxygenase, b subunit | D560_2021 | Q9AIX7 | Positive | 1898841 - 1900268 | 54483.2 |
| benzoyl-coa oxygenase/reductase, boxa protein | D560_2022 | Q9AIX6 | Positive | 1900277 - 1901494 | 44009.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




