Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | D560_1973 | Q2KUU3 | Negative | 1852035 - 1852904 | 30114.1 |
| tonb family c-terminal domain protein | D560_1974 | Not Available | Negative | 1852901 - 1853743 | 29963.6 |
| rnb domain protein | D560_1975 | P73177 | Negative | 1853818 - 1855698 | 69381.8 |
| alpha/beta hydrolase family protein | D560_1976 | P0A8Z9 | Negative | 1855746 - 1856360 | 22478.9 |
| l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | D560_1977 | P37773 | Negative | 1856357 - 1857727 | 48518.2 |
| ahpc/tsa family protein | D560_1978 | A4IQF5 | Positive | 1857801 - 1858343 | 18921.2 |
| 3-dehydroquinate dehydratase, type ii | D560_1979 | Q2KUV4 | Positive | 1858419 - 1858853 | 15489.5 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | D560_1980 | P37799 | Positive | 1858944 - 1859390 | 15433.8 |
| acetyl-coa carboxylase, biotin carboxylase subunit | D560_1981 | O52058 | Positive | 1859400 - 1860746 | 49701.8 |
| ribosomal protein l11 methyltransferase | D560_1982 | Q7WF92 | Positive | 1860837 - 1861745 | 32431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




