Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | D560_1953 | P77467 | Positive | 1834922 - 1835488 | 20092.4 |
| acyl-coa dehydrogenase, n-terminal domain protein | D560_1954 | Q5RAS0 | Positive | 1835492 - 1836661 | 42137.5 |
| amp-binding enzyme family protein | D560_1955 | Q8GQN9 | Positive | 1836701 - 1838353 | 59925.5 |
| thioesterase superfamily | D560_1956 | P44679 | Positive | 1838353 - 1838781 | 16279.5 |
| endoribonuclease l-psp family protein | D560_1957 | Q9L6B5 | Positive | 1838803 - 1839207 | 15062.1 |
| hypothetical protein | D560_1958 | Not Available | Negative | 1839204 - 1840880 | 59471.7 |
| transposase family protein | D560_1959 | Q06126 | Positive | 1841133 - 1842353 | 47435.5 |
| glutamate-1-semialdehyde-2,1-aminomutase | D560_1960 | Q2KUS4 | Negative | 1842316 - 1843695 | 48850.0 |
| thiamine-phosphate pyrophosphorylase | D560_1961 | Q2KUS6 | Negative | 1843699 - 1844352 | 22588.9 |
| phosphomethylpyrimidine kinase family protein | D560_1962 | Not Available | Negative | 1844349 - 1844729 | 12829.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




