Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | D560_1923 | Q2KUM5 | Positive | 1803574 - 1804215 | 23111.6 |
| hypothetical protein | D560_1924 | P67691 | Positive | 1804261 - 1805013 | 28403.1 |
| efflux transporter, rnd family, mfp subunit | D560_1925 | C0Q1F4 | Positive | 1805190 - 1806443 | 44413.3 |
| mmpl family protein | D560_1926 | Q668C6 | Positive | 1806450 - 1809545 | 111005.0 |
| multidrug resistance protein mdtc | D560_1927 | A7MHJ0 | Positive | 1809542 - 1812646 | 111117.0 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | D560_1928 | Q9KJC1 | Positive | 1812673 - 1814091 | 50334.3 |
| fimbrial family protein | D560_1929 | P05788 | Negative | 1814100 - 1814672 | 20161.1 |
| fimbrial family protein | D560_1930 | P17835 | Negative | 1814868 - 1815545 | 23905.3 |
| nudix domain protein | D560_1931 | P44932 | Negative | 1815677 - 1816636 | 34301.9 |
| hypothetical protein | D560_1932 | Not Available | Negative | 1816629 - 1817495 | 32783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




