Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic binding family protein | D560_1893 | A5F5P5 | Negative | 1774341 - 1775027 | 24017.9 |
| tonb dependent receptor family protein | D560_1894 | Not Available | Negative | 1775076 - 1775198 | 4748.72 |
| tonb-dependent receptor plug domain protein | D560_1895 | A7FD14 | Negative | 1775263 - 1776300 | 37154.3 |
| methionine synthase | D560_1896 | Q9I2Q2 | Positive | 1776649 - 1780404 | 138375.0 |
| putative biotin synthesis protein | D560_1897 | P30866 | Negative | 1780460 - 1780714 | 9553.6 |
| methyltransferase domain protein | D560_1898 | P30866 | Negative | 1780675 - 1781226 | 19243.0 |
| helix-turn-helix domain protein | D560_1899 | Not Available | Positive | 1781398 - 1782135 | 27711.9 |
| a/g-specific adenine glycosylase | D560_1900 | P17802 | Negative | 1782132 - 1783220 | 40145.3 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_1901 | P80910 | Positive | 1783374 - 1785086 | 62546.2 |
| pyruvate ferredoxin/flavodoxin oxidoreductase family protein | D560_1902 | P80911 | Positive | 1785083 - 1786969 | 68297.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




