Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_1883 | Not Available | Negative | 1767707 - 1767859 | 5489.71 |
| integrase core domain protein | D560_1884 | P24577 | Positive | 1768069 - 1768632 | 21202.9 |
| integrase core domain protein | D560_1885 | P24577 | Positive | 1768731 - 1768892 | 6030.23 |
| hypothetical protein | D560_1886 | Not Available | Positive | 1768953 - 1769795 | 32628.8 |
| bifunctional protein rfae, domain ii | D560_1887 | Q7WF17 | Positive | 1769830 - 1770318 | 17422.9 |
| type i secretion outer membrane, tolc family protein | D560_1888 | Q9K2Y1 | Negative | 1770331 - 1771656 | 47853.8 |
| methyltransferase domain protein | D560_1889 | Q6NCU3 | Negative | 1771661 - 1772341 | 24960.1 |
| phosphomethylpyrimidine kinase | D560_1890 | P76422 | Negative | 1772413 - 1773255 | 29776.2 |
| thiazole synthase | D560_1891 | Q2KUI1 | Negative | 1773252 - 1773992 | 26068.8 |
| vitamin b12 transport domain protein | D560_1892 | Not Available | Negative | 1774156 - 1774344 | 6824.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




