Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate regulon transcriptional regulatory protein phob | D560_1863 | P0AFJ6 | Negative | 1751445 - 1752143 | 26132.6 |
| ubiquinone/menaquinone biosynthesis methyltransferase family protein | D560_1864 | Q2KUG1 | Positive | 1752284 - 1753054 | 28036.7 |
| helix-turn-helix family protein | D560_1865 | Not Available | Positive | 1753276 - 1753902 | 22408.9 |
| integrase core domain protein | D560_1866 | P25438 | Positive | 1753875 - 1754225 | 13688.2 |
| tim44-like domain protein | D560_1867 | Not Available | Positive | 1754275 - 1755246 | 33210.5 |
| transposase family protein | D560_1868 | Q06126 | Negative | 1755305 - 1756525 | 47465.5 |
| abc-2 type transporter family protein | D560_1869 | Q56902 | Positive | 1756989 - 1757723 | 27324.4 |
| abc transporter family protein | D560_1870 | Q56903 | Positive | 1757725 - 1758453 | 26970.7 |
| phosphopantetheine attachment site family protein | D560_1871 | Not Available | Positive | 1758462 - 1758701 | 8875.57 |
| putative 3-oxoacyl-[acyl-carrier-(acp)] synthase | D560_1872 | Q9PMZ6 | Positive | 1758701 - 1759789 | 39570.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




