Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyd operon protein ybgt | D560_1843 | Q2YKD6 | Positive | 1730623 - 1730748 | 4839.82 |
| thiol reductant abc exporter, cydd subunit | D560_1844 | Q52402 | Positive | 1730897 - 1732486 | 56815.2 |
| abc transporter transmembrane region family protein | D560_1845 | P45081 | Positive | 1732489 - 1733085 | 21460.9 |
| abc transporter family protein | D560_1846 | P23886 | Positive | 1733082 - 1734137 | 36547.2 |
| adenine phosphoribosyltransferase | D560_1847 | Q2KUE4 | Positive | 1734203 - 1734751 | 20196.5 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1848 | P52689 | Negative | 1734756 - 1735646 | 33393.7 |
| outer membrane porin protein | D560_1849 | Q04064 | Positive | 1736812 - 1737564 | 27400.8 |
| threonine ammonia-lyase, biosynthetic | D560_1850 | P53607 | Negative | 1737735 - 1739243 | 55400.6 |
| putative transmembrane protein | D560_1851 | P0ADR0 | Positive | 1739348 - 1739848 | 18272.5 |
| hypothetical protein | D560_1852 | Not Available | Positive | 1739987 - 1740688 | 26202.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




