Bordetella holmesii 5589, F5101

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Bordetella

Description

Bordetella holmesii 5589, F5101 is a microaerophilic bacterium, which indicates that it thrives in environments with reduced oxygen levels. This characteristic is essential for its survival and growth, as it requires specific oxygen concentrations that are lower than those found in the atmosphere. The presence of true flagella suggests that B. holmesii 5589, F5101 is motile, enabling it to navigate its environment, which may be beneficial for colonization and interaction with host organisms. Genomic analysis reveals that B. holmesii 5589, F5101 has three replicons, indicating a complex genetic structure that may contribute to its adaptability and potential pathogenicity. The accession numbers associated with this strain—CP007494.1, CP182515.1, and CP085973.1—provide references for further genomic studies and insights into its genetic makeup. The microaerophilic nature and motility of B. holmesii 5589, F5101 suggest its ecological role in niche environments, potentially within host organisms where oxygen levels are limited. Understanding these traits can enhance our knowledge of its behavior and interactions in microbial ecosystems and its implications in human health, particularly considering that Bordetella species are often associated with respiratory infections. Further research on this bacterium may uncover its pathogenic mechanisms and contribute to the development of targeted treatments or preventive measures.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusBordetella
SpeciesBordetella holmesii
Strain5589, F5101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bordetella holmesii 5589, F5101, Complete Genome

Gene Summary

Adenine Count

688505 bp

Thymine Count

691897 bp

Guanine Count

1157119 bp

Cytosine Count

1162153 bp

Genome Length

3699674 bp

Protein-coding Genes

3912 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyd operon protein ybgtD560_1843Q2YKD6Positive1730623 - 17307484839.82
thiol reductant abc exporter, cydd subunitD560_1844Q52402Positive1730897 - 173248656815.2
abc transporter transmembrane region family proteinD560_1845P45081Positive1732489 - 173308521460.9
abc transporter family proteinD560_1846P23886Positive1733082 - 173413736547.2
adenine phosphoribosyltransferaseD560_1847Q2KUE4Positive1734203 - 173475120196.5
bacterial regulatory helix-turn-helix, lysr family proteinD560_1848P52689Negative1734756 - 173564633393.7
outer membrane porin proteinD560_1849Q04064Positive1736812 - 173756427400.8
threonine ammonia-lyase, biosyntheticD560_1850P53607Negative1737735 - 173924355400.6
putative transmembrane proteinD560_1851P0ADR0Positive1739348 - 173984818272.5
hypothetical proteinD560_1852Not AvailablePositive1739987 - 174068826202.5

Displaying genes 1841 – 1850 of 11230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.