Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | D560_1803 | P16926 | Positive | 1695726 - 1696610 | 31812.7 |
| rod shape-determining protein mred | D560_1804 | P0ABH6 | Positive | 1696594 - 1697160 | 21159.8 |
| penicillin-binding protein 2 | D560_1805 | P44469 | Positive | 1697172 - 1699073 | 70219.4 |
| rod shape-determining protein roda | D560_1806 | P44468 | Positive | 1699070 - 1700206 | 41490.3 |
| l-lactate dehydrogenase | D560_1807 | Q07251 | Negative | 1700262 - 1701320 | 37206.3 |
| na+ symporter family protein | D560_1808 | Q07252 | Negative | 1701331 - 1702824 | 52605.4 |
| bacterial regulatory s, tetr family protein | D560_1809 | A6VSX5 | Negative | 1702980 - 1703555 | 21359.0 |
| had hydrolase, ia, variant 3 family protein | D560_1810 | Q09893 | Negative | 1703586 - 1704329 | 28400.6 |
| acetylglutamate kinase | D560_1811 | A9I0K4 | Negative | 1704329 - 1705201 | 30965.9 |
| putative membrane protein | D560_1812 | Not Available | Negative | 1705248 - 1705361 | 4045.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




