Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gram-negative porin family protein | D560_1793 | Q04064 | Positive | 1684847 - 1685914 | 38413.7 |
| universal stress family protein | D560_1794 | P42297 | Negative | 1685938 - 1686807 | 31032.4 |
| hypothetical protein | D560_1795 | P45122 | Positive | 1687083 - 1687607 | 18700.5 |
| glutamate/leucine/phenylalanine/valine dehydrogenase family protein | D560_1796 | Q8Z6F6 | Negative | 1687691 - 1689028 | 48232.9 |
| exodeoxyribonuclease iii | D560_1797 | P37454 | Positive | 1689532 - 1690314 | 29392.7 |
| orotate phosphoribosyltransferase | D560_1798 | Q2KU70 | Positive | 1690362 - 1691030 | 23320.9 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase, b subunit | D560_1799 | Q2KU71 | Negative | 1691077 - 1692534 | 52710.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase, a subunit | D560_1800 | Q2KU72 | Negative | 1692537 - 1694060 | 53259.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase, c subunit | D560_1801 | Q2KU73 | Negative | 1694064 - 1694372 | 11375.6 |
| cell shape determining, mreb/mrl family protein | D560_1802 | P0A9X5 | Positive | 1694598 - 1695641 | 36833.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




