Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase, alpha subunit | D560_1713 | P32176 | Positive | 1610443 - 1612872 | 90510.3 |
| formate dehydrogenase, beta subunit | D560_1714 | P0AAJ3 | Positive | 1612883 - 1613782 | 32843.1 |
| formate dehydrogenase, gamma subunit | D560_1715 | P0AEL2 | Positive | 1613775 - 1614422 | 24778.9 |
| formate dehydrogenase accessory protein fdhe | D560_1716 | A7ML45 | Positive | 1614522 - 1615457 | 33971.6 |
| l-seryl-trna selenium transferase | D560_1717 | Q02FL3 | Positive | 1615454 - 1616869 | 50732.5 |
| selenocysteine-specific translation elongation factor | D560_1718 | P14081 | Positive | 1616866 - 1618794 | 69691.8 |
| Trna-sec | Not Available | Not Available | Positive | 1618810 - 1618904 | Not Available |
| selenide, water dikinase | D560_1720 | B1Z181 | Positive | 1618963 - 1620012 | 35677.2 |
| transcriptional regulator, lysr family domain protein | D560_1721 | Not Available | Positive | 1620784 - 1620972 | 7143.37 |
| dsba-like thioredoxin domain protein | D560_1722 | Q9X9Q7 | Positive | 1621144 - 1621686 | 20342.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




