Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D560_1683 | A1TTV9 | Positive | 1584847 - 1585548 | 24364.5 |
| hsp70 family protein | D560_1684 | P36928 | Negative | 1585553 - 1586794 | 44684.2 |
| diguanylate cyclase domain protein | D560_1685 | Q9I310 | Negative | 1586960 - 1587826 | 31209.1 |
| transposase family protein | D560_1686 | Q06126 | Positive | 1587988 - 1589208 | 47435.5 |
| hypothetical protein | D560_1687 | P9WLH6 | Negative | 1589517 - 1589966 | 16074.6 |
| methylated-dna-[]-cysteine s-methyltransferase family protein | D560_1688 | P06134 | Negative | 1589971 - 1591092 | 39996.4 |
| 2og-fe(ii) oxygenase superfamily protein | D560_1689 | P37462 | Negative | 1591187 - 1591837 | 23411.3 |
| hypothetical protein | D560_1690 | P9WLH6 | Negative | 1591839 - 1592567 | 26843.0 |
| hypothetical protein | D560_1691 | Q45584 | Positive | 1592855 - 1593304 | 15520.7 |
| hypothetical protein | D560_1692 | Not Available | Negative | 1593353 - 1593508 | 5967.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




