Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | D560_1663 | P45857 | Positive | 1565197 - 1566327 | 41262.7 |
| coa-transferase iii family protein | D560_1664 | K3VD64 | Positive | 1566340 - 1567482 | 41308.5 |
| amp-binding enzyme family protein | D560_1665 | Q8XA34 | Positive | 1567479 - 1568540 | 37713.4 |
| amp-binding enzyme family protein | D560_1666 | M4IQQ7 | Positive | 1568566 - 1569264 | 25998.2 |
| transcriptional regulator, tetr family | D560_1667 | Not Available | Positive | 1569465 - 1569905 | 16521.1 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1668 | P03030 | Negative | 1569954 - 1570856 | 33219.9 |
| carboxymuconolactone decarboxylase family protein | D560_1669 | P20370 | Positive | 1571175 - 1571372 | 6873.51 |
| 3-hydroxyisobutyrate dehydrogenase | D560_1670 | Q9I5I6 | Positive | 1571374 - 1572255 | 29971.6 |
| tripartite tricarboxylate transporter receptor family protein | D560_1671 | Q45389 | Positive | 1572284 - 1573252 | 33821.3 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1672 | P52661 | Negative | 1573461 - 1574450 | 35890.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




