Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter receptor family protein | D560_1653 | P70791 | Negative | 1555118 - 1556089 | 33992.2 |
| amidase family protein | D560_1654 | K9NBS6 | Negative | 1556140 - 1556898 | 27834.2 |
| amidase family protein | D560_1655 | A0LSR0 | Negative | 1556941 - 1557552 | 21125.1 |
| bacterial transcriptional regulator family protein | D560_1656 | Q52154 | Positive | 1557668 - 1558438 | 28279.3 |
| helix-turn-helix family protein | D560_1657 | Not Available | Positive | 1558650 - 1559276 | 22055.3 |
| integrase core domain protein | D560_1658 | P24577 | Positive | 1559434 - 1560075 | 24102.0 |
| tripartite tricarboxylate transporter receptor family protein | D560_1659 | P0A177 | Negative | 1560043 - 1561155 | 39648.9 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_1660 | O53554 | Negative | 1561227 - 1562834 | 55550.0 |
| glycosyl hydrolase family 88 family protein | D560_1661 | O31521 | Positive | 1562932 - 1563981 | 38471.8 |
| alpha-methylacyl-coa racemase | D560_1662 | Q9UHK6 | Positive | 1563984 - 1565168 | 42636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




