Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | D560_1643 | Not Available | Positive | 1546797 - 1547024 | 8863.83 |
| smp-30/gluconolaconase/lre-like region family protein | D560_1644 | Q01578 | Positive | 1547262 - 1547609 | 13011.4 |
| integrase core domain protein | D560_1645 | P24577 | Positive | 1547710 - 1548486 | 28453.9 |
| transposase family protein | D560_1646 | Q06126 | Negative | 1548841 - 1550079 | 48131.3 |
| branched-chain amino acid transport system / permease component family protein | D560_1647 | D4GPW1 | Positive | 1550164 - 1550718 | 19487.9 |
| amidohydrolase family protein | D560_1648 | P25524 | Positive | 1550734 - 1552011 | 46222.3 |
| cysteine dioxygenase type i family protein | D560_1649 | Q9I0N5 | Negative | 1552066 - 1552623 | 20377.2 |
| nitronate monooxygenase family protein | D560_1650 | A4XYG7 | Negative | 1552718 - 1553881 | 42077.0 |
| acylphosphatase family protein | D560_1651 | Q2KTJ9 | Positive | 1554050 - 1554334 | 10708.8 |
| bacterial regulatory s, tetr family protein | D560_1652 | A0R4Z6 | Negative | 1554358 - 1554996 | 23405.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




