Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix family protein | D560_1633 | P42514 | Negative | 1535723 - 1537204 | 54318.8 |
| fecr family protein | D560_1634 | P23485 | Negative | 1537332 - 1538363 | 37417.5 |
| rna polymerase sigma factor, sigma-70 family protein | D560_1635 | P23484 | Negative | 1538437 - 1538991 | 20347.4 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1636 | P52661 | Negative | 1539580 - 1540497 | 33654.2 |
| pyridoxal phosphate biosynthetic pdxa family protein | D560_1637 | Q9I1Q5 | Positive | 1540641 - 1541675 | 36556.0 |
| mandelate racemase / muconate lactonizing enzyme, c-terminal domain protein | D560_1638 | A4FLW9 | Positive | 1541705 - 1542877 | 44214.1 |
| l-2-keto-3-deoxyarabonate dehydratase | D560_1639 | Q1JUQ0 | Positive | 1542883 - 1543812 | 34039.1 |
| hypothetical protein | D560_1640 | Not Available | Positive | 1543875 - 1544027 | 5112.17 |
| tripartite tricarboxylate transporter receptor family protein | D560_1641 | B3EWP1 | Positive | 1544037 - 1544876 | 28070.0 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | D560_1642 | O69787 | Positive | 1544873 - 1546336 | 53531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




