Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | D560_1613 | Q9Y810 | Positive | 1519054 - 1519812 | 27427.1 |
| putative membrane protein | D560_1614 | Not Available | Positive | 1519839 - 1520411 | 20997.5 |
| cytochrome oxidase assembly family protein | D560_1615 | Q04443 | Positive | 1520416 - 1521429 | 36626.2 |
| protoheme ix farnesyltransferase | D560_1616 | Q2KTX0 | Positive | 1521457 - 1522353 | 32773.2 |
| tat (twin-arginine translocation) pathway signal sequence domain protein | D560_1617 | Q1RIN4 | Positive | 1522377 - 1522985 | 21639.0 |
| hypothetical protein | D560_1618 | Not Available | Negative | 1522998 - 1523276 | 10284.2 |
| glycine zipper 2tm domain protein | D560_1619 | Not Available | Positive | 1523313 - 1523924 | 20943.3 |
| hypothetical protein | D560_1620 | Not Available | Positive | 1523936 - 1524700 | 26120.1 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | D560_1621 | Q2KTX5 | Positive | 1524766 - 1525938 | 41955.6 |
| bacterial transferase hexapeptide family protein | D560_1622 | Q2KTX5 | Positive | 1525935 - 1526138 | 7220.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




