Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain protein | D560_1603 | P0C026 | Negative | 1511787 - 1512608 | 29920.9 |
| integrase core domain protein | D560_1604 | P24577 | Positive | 1513355 - 1514176 | 31158.7 |
| cytochrome c family protein | D560_1605 | P08306 | Positive | 1514217 - 1514801 | 20670.5 |
| helix-turn-helix family protein | D560_1606 | Not Available | Positive | 1514900 - 1515526 | 22115.3 |
| integrase core domain protein | D560_1607 | P25438 | Positive | 1515499 - 1515849 | 13674.2 |
| hypothetical protein | D560_1608 | Not Available | Negative | 1515846 - 1515995 | 5258.26 |
| cytochrome c oxidase, subunit i | D560_1609 | P31833 | Positive | 1515951 - 1517567 | 59903.1 |
| hypothetical protein | D560_1610 | Not Available | Positive | 1517564 - 1517857 | 10853.5 |
| cytochrome c oxidase subunit iii family protein | D560_1611 | O03170 | Positive | 1517891 - 1518766 | 32778.6 |
| hypothetical protein | D560_1612 | Not Available | Negative | 1518819 - 1519019 | 7224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




