Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like polyketide cyclase family protein | D560_1533 | Not Available | Negative | 1451497 - 1451928 | 15878.1 |
| dj-1/pfpi family protein | D560_1534 | Q09675 | Negative | 1451960 - 1452472 | 18164.3 |
| n-terminal domain of dj-1_pfpi family protein | D560_1535 | Not Available | Negative | 1452490 - 1452984 | 18602.9 |
| glutathione s-transferase | D560_1536 | P0A9D3 | Negative | 1453038 - 1453628 | 21806.7 |
| hypothetical protein | D560_1537 | Not Available | Positive | 1453889 - 1454032 | 5458.6 |
| bacterial regulatory s, tetr family protein | D560_1538 | P67431 | Positive | 1454182 - 1454718 | 19095.8 |
| n-terminal domain of dj-1_pfpi family protein | D560_1539 | Q04432 | Positive | 1454810 - 1455505 | 24312.5 |
| transcriptional regulator, arac family domain protein | D560_1540 | P36547 | Positive | 1455659 - 1455910 | 9173.69 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_1541 | P36547 | Positive | 1455965 - 1456723 | 28024.5 |
| integrase core domain protein | D560_1542 | P37007 | Negative | 1456720 - 1457136 | 16169.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




