Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_1513 | Not Available | Positive | 1433279 - 1433596 | 11339.5 |
| amidase family protein | D560_1514 | Q39ZK0 | Positive | 1434036 - 1435325 | 46262.6 |
| 2-isopropylmalate synthase | D560_1515 | A9HW07 | Negative | 1435389 - 1437098 | 63168.5 |
| putative membrane protein | D560_1516 | Not Available | Negative | 1437469 - 1438191 | 27078.8 |
| rna polymerase sigma-54 factor | D560_1517 | P28615 | Positive | 1438247 - 1439626 | 50375.3 |
| putative bacterioferritin-associated ferredoxin | D560_1518 | Not Available | Positive | 1439827 - 1440054 | 7396.78 |
| eama-like transporter family protein | D560_1519 | O32256 | Positive | 1440190 - 1441098 | 31890.1 |
| bacterioferritin | D560_1520 | P22759 | Positive | 1441412 - 1441888 | 18157.8 |
| meta-pathway of phenol degradation family protein | D560_1521 | Not Available | Negative | 1442011 - 1442751 | 26031.6 |
| succinate-semialdehyde dehydrogenase | D560_1522 | Q9I6M5 | Negative | 1443074 - 1444390 | 47061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




