Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c family protein | D560_1463 | P43302 | Positive | 1381238 - 1381939 | 24432.3 |
| resb-like family protein | D560_1464 | A5GV87 | Positive | 1382106 - 1382672 | 21399.2 |
| resb-like family protein | D560_1465 | Q9XIA4 | Positive | 1382669 - 1384117 | 52242.4 |
| cytochrome c-type biogenesis protein ccsb | D560_1466 | Q31QX6 | Positive | 1384114 - 1385442 | 49168.9 |
| diaminopimelate decarboxylase | D560_1467 | P19572 | Negative | 1385512 - 1386801 | 46520.7 |
| iron donor protein cyay | D560_1468 | Q2L201 | Positive | 1387030 - 1387359 | 12103.1 |
| penicillin-binding, 1a family protein | D560_1469 | O87579 | Negative | 1387407 - 1389800 | 87542.5 |
| shikimate kinase family protein | D560_1470 | Q2L1Z2 | Positive | 1389968 - 1390603 | 23130.1 |
| 3-dehydroquinate synthase | D560_1471 | Q7WR84 | Positive | 1390600 - 1391682 | 38759.9 |
| dgtpase family protein | D560_1472 | Q7WR83 | Positive | 1391714 - 1392841 | 42845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




