Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l6 | D560_1443 | Q2L270 | Positive | 1368480 - 1369013 | 19056.1 |
| ribosomal protein l18 | D560_1444 | Q2L268 | Positive | 1369032 - 1369397 | 12996.8 |
| ribosomal protein s5 | D560_1445 | Q2L266 | Positive | 1369413 - 1369934 | 18104.2 |
| ribosomal protein l30 | D560_1446 | Q2L263 | Positive | 1369938 - 1370123 | 6778.41 |
| ribosomal protein l15 | D560_1447 | Q2L260 | Positive | 1370133 - 1370573 | 15321.6 |
| preprotein translocase, secy subunit | D560_1448 | P0AGA4 | Positive | 1370588 - 1371913 | 48327.6 |
| translation initiation factor if-1 | D560_1449 | Q2L254 | Positive | 1371923 - 1372141 | 8264.23 |
| ribosomal protein l36 | D560_1450 | Q2L250 | Positive | 1372177 - 1372290 | 4332.59 |
| 30s ribosomal protein s13 | D560_1451 | Q2L248 | Positive | 1372333 - 1372698 | 13543.8 |
| 30s ribosomal protein s11 | D560_1452 | Q2L245 | Positive | 1372714 - 1373115 | 14005.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




