Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative substrate binding protein of abc transporter system | D560_1433 | Q2YKQ9 | Negative | 1360473 - 1361645 | 42321.7 |
| alpha/beta hydrolase fold family protein | D560_1434 | P26174 | Negative | 1361642 - 1362511 | 32610.8 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_1435 | P82606 | Positive | 1362664 - 1363647 | 36367.1 |
| aldehyde dehydrogenase family protein | D560_1436 | Q1JUP4 | Negative | 1363684 - 1365111 | 51566.9 |
| aspartyl/asparaginyl beta-hydroxylase family protein | D560_1437 | A0JMH0 | Positive | 1365357 - 1366109 | 28919.7 |
| ribosomal protein l14 | D560_1438 | Q2L284 | Positive | 1366495 - 1366863 | 13209.5 |
| ribosomal protein l24 | D560_1439 | A9IHU0 | Positive | 1366874 - 1367194 | 11417.0 |
| ribosomal l5 family protein | D560_1440 | Q2L279 | Positive | 1367335 - 1367745 | 15295.7 |
| ribosomal s14p/s29e family protein | D560_1441 | Q7WRB0 | Positive | 1367758 - 1368063 | 11735.5 |
| ribosomal s8 family protein | D560_1442 | Q2L273 | Positive | 1368074 - 1368469 | 14315.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




