Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s19 | D560_1423 | Q2L2E7 | Positive | 1354495 - 1354770 | 10203.6 |
| ribosomal protein l22 | D560_1424 | A9IIZ3 | Positive | 1354774 - 1355103 | 11783.4 |
| ribosomal protein s3 | D560_1425 | Q2L2C0 | Positive | 1355113 - 1356114 | 37992.1 |
| ribosomal l16p/l10e family protein | D560_1426 | Q2L2B8 | Positive | 1356146 - 1356316 | 6105.34 |
| ribosomal protein l29 | D560_1427 | Q7WRB7 | Positive | 1356328 - 1356519 | 7098.7 |
| 30s ribosomal protein s17 | D560_1428 | Q2L2B2 | Positive | 1356522 - 1356803 | 10694.0 |
| branched-chain amino acid transport system / permease component family protein | D560_1429 | P21628 | Negative | 1356905 - 1357915 | 36172.5 |
| branched-chain amino acid transport system / permease component family protein | D560_1430 | P21627 | Negative | 1357956 - 1358975 | 35665.5 |
| putative transporter | D560_1431 | P0A192 | Negative | 1358972 - 1359271 | 10583.0 |
| abc transporter family protein | D560_1432 | P0A9S8 | Negative | 1359707 - 1360468 | 27644.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




