Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase, beta subunit | D560_1403 | Q2L2M3 | Positive | 1331066 - 1335178 | 153350.0 |
| dna-directed rna polymerase, beta' subunit | D560_1404 | Q2L2L3 | Positive | 1335178 - 1339419 | 156318.0 |
| hypothetical protein | D560_1405 | Not Available | Negative | 1339582 - 1339761 | 6577.07 |
| putative membrane protein | D560_1406 | Q96LW2 | Positive | 1340176 - 1341330 | 40577.4 |
| his kinase a domain protein | D560_1407 | P23545 | Negative | 1341337 - 1342062 | 26616.9 |
| his kinase a phosphoacceptor 13 domain protein | D560_1408 | Not Available | Negative | 1342245 - 1342844 | 22343.8 |
| chase2 domain protein | D560_1409 | Not Available | Negative | 1343017 - 1343640 | 22691.6 |
| fecr family protein | D560_1410 | Not Available | Negative | 1343968 - 1344753 | 27343.0 |
| response regulator | D560_1411 | Q9F868 | Negative | 1344811 - 1345296 | 18277.2 |
| response regulator | D560_1412 | Q2YIF7 | Negative | 1345318 - 1345563 | 9037.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




