Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase, n-terminal domain protein | D560_0132 | P45857 | Positive | 122436 - 123608 | 42734.8 |
| coa-transferase iii family protein | D560_0133 | Q7TNE1 | Positive | 124110 - 124823 | 26305.4 |
| bacterial regulatory s, gntr family protein | D560_0134 | O31761 | Positive | 124892 - 125617 | 26861.1 |
| hpch/hpai aldolase/citrate lyase family protein | D560_0135 | P9WPE0 | Positive | 125621 - 126043 | 15515.7 |
| hypothetical protein | D560_0136 | Not Available | Positive | 126308 - 126442 | 4469.43 |
| outer membrane autotransporter barrel domain protein | D560_0137 | Q9JMS3 | Negative | 126426 - 129713 | 110904.0 |
| hypothetical protein | D560_0138 | Not Available | Negative | 129961 - 131103 | 37128.1 |
| hypothetical protein | D560_0139 | Not Available | Negative | 131480 - 131605 | 4298.28 |
| tonb dependent receptor family protein | D560_0140 | Q08017 | Negative | 131765 - 133093 | 50337.9 |
| tonb-dependent receptor plug domain protein | D560_0141 | P38047 | Negative | 133377 - 134168 | 27467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




