Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial extracellular solute-binding s, 5 middle family protein | D560_1373 | Q8X6V9 | Negative | 1303186 - 1304766 | 56838.0 |
| trna modification gtpase trme | D560_1374 | Q2KTI2 | Positive | 1304888 - 1306240 | 48500.0 |
| prolyl oligopeptidase family protein | D560_1375 | P55577 | Positive | 1306357 - 1308423 | 76912.0 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1376 | P52661 | Negative | 1308462 - 1309427 | 34722.5 |
| malic enzyme, nad binding domain protein | D560_1377 | O30807 | Positive | 1309588 - 1311354 | 64185.9 |
| phosphate acetyl/butaryl transferase family protein | D560_1378 | Q9ZFV8 | Positive | 1311351 - 1311881 | 18552.3 |
| dna-binding response regulator | D560_1379 | E1WA34 | Positive | 1312460 - 1313140 | 25433.8 |
| his kinase a domain protein | D560_1380 | P45336 | Positive | 1313172 - 1314584 | 51162.7 |
| tripartite tricarboxylate transporter receptor family protein | D560_1381 | O34439 | Positive | 1314682 - 1315683 | 35820.3 |
| tripartite tricarboxylate transporter tctb family protein | D560_1382 | Not Available | Positive | 1315753 - 1316190 | 15466.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




