Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l34 | D560_1363 | Q7WDJ8 | Positive | 1292351 - 1292485 | 5251.67 |
| ribonuclease p family protein | D560_1364 | Q2KTI7 | Positive | 1292640 - 1292978 | 12075.8 |
| membrane protein insertase, yidc/oxa1 | D560_1365 | Q2KTI5 | Positive | 1293331 - 1294992 | 60637.5 |
| catalase/peroxidase hpi | D560_1366 | Q2KTI4 | Negative | 1295131 - 1297386 | 82980.3 |
| putative membrane protein | D560_1367 | Not Available | Negative | 1297659 - 1297778 | 4059.03 |
| amidohydrolase family protein | D560_1368 | P45493 | Negative | 1298056 - 1299255 | 43390.8 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_1369 | P42065 | Negative | 1299304 - 1300302 | 36323.2 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_1370 | P42064 | Negative | 1300314 - 1301285 | 35363.1 |
| n-terminal tm domain of oligopeptide transport permease c family protein | D560_1371 | A0A0H2ZFV0 | Negative | 1301297 - 1302202 | 31959.9 |
| binding--dependent transport system inner membrane component family protein | D560_1372 | A0A0H2ZGW7 | Negative | 1302199 - 1303131 | 33326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




