Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | D560_1343 | P40401 | Positive | 1273457 - 1273657 | 7320.18 |
| short chain dehydrogenase family protein | D560_1344 | P50199 | Positive | 1273654 - 1274493 | 29197.2 |
| aldehyde dehydrogenase family protein | D560_1345 | O34660 | Positive | 1274542 - 1275969 | 50459.1 |
| integrase core domain protein | D560_1346 | P24577 | Negative | 1276064 - 1276840 | 28453.9 |
| short chain dehydrogenase family protein | D560_1347 | P94681 | Positive | 1276917 - 1277681 | 27199.5 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_1348 | P00893 | Negative | 1277845 - 1278240 | 14128.9 |
| thiamine pyrophosphate enzyme, n-terminal tpp binding domain protein | D560_1349 | P00893 | Negative | 1278212 - 1279384 | 41806.5 |
| asnc family protein | D560_1350 | P42179 | Positive | 1279644 - 1280123 | 18053.7 |
| bestrophin, rfp-tm, chloride channel family protein | D560_1351 | Q98E66 | Negative | 1280111 - 1281037 | 34280.1 |
| set domain protein | D560_1352 | P55200 | Positive | 1281187 - 1281681 | 18006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




