Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase domain protein | D560_1313 | Not Available | Negative | 1240359 - 1240484 | 4532.62 |
| dihydrodipicolinate synthetase family protein | D560_1314 | Q5V5D4 | Negative | 1240456 - 1241166 | 24673.4 |
| hypothetical protein | D560_1315 | Not Available | Negative | 1241292 - 1241444 | 5356.68 |
| gaf domain protein | D560_1316 | P76270 | Negative | 1241441 - 1241929 | 17432.8 |
| alanine-glyoxylate amino-transferase family protein | D560_1317 | Q72LL6 | Positive | 1242071 - 1243270 | 43191.2 |
| 4-hydroxybenzoate polyprenyl transferase | D560_1318 | Q93YP7 | Positive | 1243346 - 1244269 | 34870.9 |
| hypothetical protein | D560_1319 | Not Available | Positive | 1244628 - 1244984 | 12291.2 |
| bacterial regulatory s, gntr family protein | D560_1320 | P0ACL6 | Negative | 1245128 - 1245859 | 27106.5 |
| malate synthase g | D560_1321 | Q7VT71 | Positive | 1246098 - 1248269 | 79158.1 |
| abc transporter family protein | D560_1322 | Q8FVV5 | Negative | 1248327 - 1249400 | 39188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




