Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase family protein | D560_1293 | Q2L1G9 | Positive | 1220837 - 1221625 | 27377.2 |
| putative exported protein | D560_1294 | Not Available | Positive | 1221638 - 1221802 | 6101.42 |
| 3-deoxy-d-manno-octulosonic-acid transferase family protein | D560_1295 | Q45374 | Negative | 1221811 - 1223082 | 45917.6 |
| lipopolysaccharide heptosyltransferase i | D560_1296 | P24173 | Negative | 1223095 - 1224099 | 37292.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D560_1297 | Q9HU21 | Negative | 1224178 - 1224750 | 20412.2 |
| glucose-1-phosphate thymidylyltransferase | D560_1298 | P55255 | Negative | 1224747 - 1225628 | 32459.3 |
| dtdp-4-dehydrorhamnose reductase | D560_1299 | P37778 | Negative | 1225625 - 1226524 | 32824.2 |
| dtdp-glucose 4,6-dehydratase | D560_1300 | P26391 | Negative | 1226521 - 1227579 | 38651.8 |
| o-antigen ligase family protein | D560_1301 | P44067 | Positive | 1227797 - 1229041 | 44412.4 |
| carbon monoxide dehydrogenase subunit g family protein | D560_1302 | Not Available | Positive | 1229149 - 1229718 | 19897.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




